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Originally posted in https://github.com/sars-cov-2-variants/lineage-proposals/issues/2081
There is a another recent DeFluQe branch that seems expanding recently
KP.3.2 >> C18981T > C21590T > S:S31…
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**https://github.com/sars-cov-2-variants/lineage-proposals/issues**
To reduce the amount of work and to keep this page readable, we in the variant spotters community have set up via the impulse and…
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We examined the mutational spectrum of the entire SARS-CoV-2 ARG in our preprint, but the mutational spectrum has been shown to differ by variant of concern.
[Bloom et al. (2023)](https://www.ncbi.…
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Transferred from sars-cov-2-variants/lineage-proposals#1932.
MC.1> C13297T> C14220T> G24386T(S:A942S)
Query: C8293T, C13297T, G24386T
Earliest sequence: 07-16 California, US (from Serbia) EPI_ISL…
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Title: Genetic Variants of SARS-CoV-2—What Do They Mean?
# General Information
## Please paste a link to the paper or a citation here:
Link: https://jamanetwork.com/journals/jama/fullarticl…
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[Extensive neutralization against SARS-CoV-2 variants elicited by Omicron-specific subunit vaccine booster](https://www.biorxiv.org/content/10.1101/2022.03.07.483373v2)
- Pre-print
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Transferred from sars-cov-2-variants/lineage-proposals#1971
JN.1.67.1> T21738C(S:F59S), G22599C(S:R346T)
Query: T21738C, G22599C, G26660T
It's placed under JN.1.67.1> G22599C> T21738C yet, but …
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Description: BA.2.86.1/EG.5.1* (or XDT or XDL or EG.*), BA.2.86.1 Spike, EG.5.1 end.
Private mutations: Really private: C1779T, C2070T, C8802T
From BA.2.86.1: T11614C
Breakpoints: between nucleotid…
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## XBB.1.9* Lineage Tracker
### L455F
- [ ] FL.16 > T22928C(**S:F456L**) > A13913G(ORF1b:N149S), T16029C > G960A(ORF1a:R232H), A2589G(ORF1a:E775G), C2892T(ORF1a:A876V), _rev_T3511C_, T4008A(ORF1…
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From https://github.com/sars-cov-2-variants/lineage-proposals/issues/1908
XEC has three main branches one defined by Orf1a:A599T the other defined by Orf1a:I1367L that is convergent with Kp.3.3.4
…