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Hello,
I am trying to apply CHOIR on my precomputed clusters from a method I developed. I am working with the PBMC3k dataset in fact.
Preprocessing is exactly followed step by step from here:
h…
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I was recently reminded of https://github.com/galaxyproject/galaxy/pull/12327 (thanks again @jmchilton) and somehow we've not done anything about it for 2 years, but we really should!
We have IDs…
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Hello,
I am interested to test `HarmonizR` on single-cell proteomics data. However, I run into an error that doesn't provide much guidance on how to solve it. Here is a minimal example, using the …
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For new term requests, please provide the following information:
## Preferred term label
PhenoCycler
## Synonyms
CODEX, PhenoCycler-Fusion
## Textual definition
A spatial discovery s…
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such as:
quilt+s3://interline-quiltdemo#package=WDR5/EXP22000894@ed6ebf851478cf665ed435e0d718e78c9d519fd461717f0669c9538527f095f7&path=cf_out%2FO43353-432-523__O43353-432-523_relaxed_rank_1_model_2…
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I used MSConverter to convert Agilent .d file to .mzXML file. Then use Fragpipe for database searching.
The Run was stopped. Please help!
System OS: Windows 10, Architecture: AMD64
Java Info:…
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### Type
Conference
### Description
Next generation sequencing has been and is still revolutionizing discoveries across life sciences. While established sequencing technologies are now fully embedd…
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Hi— In Hao et al, Nat Biotech 2023, you discussed the possibility of integrating scRNA-seq with other single-cell proteomics such as CODEX or CITE-seq. Given the wide use of FACS, I am asking about th…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/TrigosTeam/SPIAT
Confirm the following by editing…
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The tab is currently called "Research Teams", which is confusing/not great. 😕
![image](https://github.com/gf-dcc/portal/assets/32753274/2143b6e4-635f-4863-a3c7-b864c7d8b90d)
@cconrad8 original…