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corceslab
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CHOIR
CHOIR : Clustering Hierarchy Optimization by Iterative Random forests (www.CHOIRclustering.com)
MIT License
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Error: 'CDF' is not an exported object from 'namespace:spatstat.explore'
#18
velten-lab
opened
1 week ago
0
spatstat.explore::CDF moved to spatstat.univar::CDF
#17
agdenadel
opened
2 months ago
0
Change spatstat.explore to spatstat.univar since the needed function …
#16
agdenadel
closed
2 months ago
0
memory limit when sourcing R script
#15
ilayda-ii
opened
3 months ago
0
'seurat_object' bug
#14
inofechm
closed
4 months ago
2
Starting with pruneTree and using harmony reduction, do I still need to correct batch effect in the pruneTree?
#13
YiweiNiu
closed
8 months ago
4
Enable countsplitting, bug fixes related to batch correction
#12
catpetersen
closed
9 months ago
0
SCTransform normalization error
#11
Carolina-Toste
closed
8 months ago
2
replace seurat_object (a nonexistent object) with object
#10
agdenadel
closed
9 months ago
1
plotCHOIR split.by option
#9
Carolina-Toste
closed
8 months ago
2
Running Harmony Batch Correction & Providing Clusters to pruneTree
#8
ejscience
closed
8 months ago
4
Unexpectledly large number of clusters
#7
smorabit
opened
9 months ago
5
Providing pre-generated clusters
#6
alifarhat40
closed
9 months ago
17
how to extract the PCs and UMAP coordinates after running CHOIR? Misc slots are null
#5
klai001
closed
9 months ago
2
Two datasets for Random Forest
#4
iacopogentile
closed
9 months ago
3
Improve compatibility with Seurat v5 and update documentation.
#3
catpetersen
closed
10 months ago
0
Update color palettes and documentation
#2
catpetersen
closed
10 months ago
0
fix a few typos in webpage docs
#1
rcorces
closed
1 year ago
0