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Hi,
Firstly, I want to thank you for this amazing tool! I've been using it consistently during my PhD, and it has been immensely helpful!
I have a few questions about the circularization check…
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Sometimes a very long line does not start at where it is supposed at but a line below it. See the screenshot below.
![image](https://user-images.githubusercontent.com/438579/209606520-f97fdd36-032…
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Error in initialize(value, ...): l'argomento "go_id" non è specificato e non ha un valore predefinito
Traceback:
1. buildIdx(entrezIDs = orthologs_biomarkers_monkey_delta_entrez_human$entrezgene_…
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Record all types of info for understanding this project better
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This is hard for illumina. For nanopore I guess it is possible to only take the first 200 base pairs from either end, rather than the entire sequence.
Currently most of the overrepresented sequences…
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Dear Adam,
It is amazing to find such a great tool for telomere anchoring! But I would like to say some expression you mentioned in the tutorial is blurred, especially the input and output file (li…
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Dear developers,
Thanks a lot for writing this super easy-to-use tool!
I'm new in doing scaffolding with Hi-C data and also in using SALSA. I recently ran salsa with our Omni-C data for scaffo…
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Dear Adam,
I hope you are doing well. I just got to know about this tool to find telomers in assembled genomes. I Am trying to run this on one of my assembled genomes but the documentation in readm…
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FYPO uses some EQs using [RO:0001025](https://www.ebi.ac.uk/ols/ontologies/ro/properties?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FRO_0001025), located in, in conjunction with SO terms such as
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Hi there,
I've sequenced some samples with Pacbio following telomere enrichment as described in your paper and am trying to analyze the data.
I attempted:
telomap [reads.fa] [capture_oligo.fa]…