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**Describe the issue with the metadata**
It would be helpful to have a chip-seq specific template. EpigeneticsSequencingAssay has content that is not relevant (e.g. bisulfiteConversionKitID) and is m…
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From @pgarmiri
https://github.com/geneontology/go-annotation/issues/2941
GO:0070985
transcription factor TFIIK complex
Cellular Component
Definition (GO:0070985 GONUTS page)
A transcrip…
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Hi, I am using RcisTarget for the GRN construction using SCENIC.
I wanted to investigate the Rcistarget database in order to know which genes are transcription factors and which genes are target ge…
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https://doi.org/10.1093/bioinformatics/btx480
>MOTIVATION:
An accurate characterization of transcription factor (TF)-DNA affinity landscape is crucial to a quantitative understanding of the molecu…
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_A colleague from the lab made this little sum up of modular transcription based biosensors. It is definitely worth reading and maybe even creating our own version in Portuguese? Why not..._
### Tr…
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This is the example, discussed in Hinxton, that illustrates the relationship between a transcription factor involved in neuron fate specification and the downstream behaviors that are affected when th…
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Going forward, I will add problems to this Googlesheet:
https://docs.google.com/spreadsheets/d/1AME11i0L9TtGqMINUECFKgchKfZWNdk7RvaGM6VyeBY/edit#gid=0
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Hi, I want to use the S3norm for my ChIP-seq dataset normalization. But before I use it, I want to ask some questions on the usage to clarify:
1. I will run the S3norm in 4 treatments but using the…
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Hello,
I am working on TBI in killifish using bioinformatics approach.
I want to investigate killifish clusters and it’s subclusters as it is not very well studied. I want to discover the cell typ…