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### Description
In conjunction with developing a PR for changing filters and settings for variants called with Manta, I reached out to one of our customers to ask if they were aware of any WGS cases …
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Certainly! Let's dive into a comprehensive brainstorm on how your code and project can evolve to achieve your goals. We'll explore various ideas, metrics, and improvements that could help you optimize…
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Hi,
I would like to benchmark a method not included in your repository. Could you please advise how to use your code to do this? I would like to compare my caller to the callers in your benchmark.
…
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Hello @jodyphelan,
We are currently implementing the analysis of IS6110 insertions onto our structural variants workflow, but we are running into some unexpected TBProfiler outputs.
The attache…
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### Description
Using the now-latest commit d4d856767d89faf6e9ebae069671a9151c2c7f31, feeding capa a .NET 8.0 Ahead-of-Time compiled binary causes multiple issues to crop up.
- For the stan…
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Create a predicate to test if variant affects a codon that encodes an aminoacid of interest.
ielis updated
2 weeks ago
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Hi Prof. Xijin,
I am proposing to use iDEP for pathway analysis in a multi-omics model. We have RNA seq gene expression, DNA methylation and genetic variants SNPs data. I am wondering if I can use…
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### Is your feature request related to a problem?
Im not sure, if i'm missing something, but i cant find a way to set the language, country and variant parameters for the icu_collation_keyword throug…
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docker-compose.yml:
```yml
version: '3.2'
services:
exomiser:
image: exomiser/exomiser-cli:13.2.0
user: ${UID}:${GID}
environment:
- SPRING_CONFIG_LOCATION=/exomise…
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运行 2_linkage_disequilibrium_analysis，报错：
`Clumping q7JdGx, 995 variants, using EUR population reference
Error in get_plink_exe() : 没有"get_plink_exe"这个函数`
加入：
`library(plinkbinr)`
成功运行2_linkag…