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Product name change in definition of GO term D-arabinono-1,4-lactone oxidase activity (MF GO:0003885)
Current GO term definition:
Catalysis of the reaction: D-arabinono-1,4-lactone + O2 = D-erythro-a…
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What is a vitamine?
```
[Term]
id: GO:0033883
name: pyridoxal phosphatase activity
def: "Catalysis of the reaction: pyridoxal 5'-phosphate + H2O = pyridoxal + phosphate." [EC:3.1.3.74]
synonym: "PLP …
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Hi,
Looks like it's a TPV for "3'-5' exonuclease activity" to be a descendent of "hydrolase activity". In E. coli, there is a 3'-5' activity that is phosphorolytic instead of hydrolytic.
This of cou…
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Hello,
At the moment, we have the function terms:
glycosyltransferase ; GO:0016932 and
transferase, transferring glycosyl groups; GO:0016757
These appear to have the same function to me. Is the…
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Hello,
At the moment, we have the function terms:
glycosyltransferase ; GO:0016932 and
transferase, transferring glycosyl groups; GO:0016757
These appear to have the same function to me. Is the…
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```
Current parsing of serialized
uk.ac.qmul.sbcs.evolution.convergence.util.SitewiseSpecificLikelihoodSupportAaml
objects for local examination of HTC results depends on specific order of data
in …
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Hi,
I was about to use this term (GO:0004158) and saw from the comment that it is in the process of being obsoleted. What will it be replaced by/ what can I use instead? Thanks
Antonia.
Reported by…
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There's two reactions listed for EC:4.1.1.28, and a different definition in the corresponding GO term, GO:0004058:
http://www.chem.qmul.ac.uk/iubmb/enzyme/EC4/1/1/28.html
Reaction: (1) L-dopa = dopam…
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Hello,
1/
I think the parentage of peroxiredoxin activity ; GO:0051920 (EC:1.11.1.15) needs revising. It's currently:
is_a: GO:0016705 ! oxidoreductase activity, acting on paired donors, with incorp…
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```
Hi, cutadapt seems to be excessively trimming reads.
e.g. see the 3bp read remaining below.
I have specified (lots of ) multiple ~20bp adapters with -g, --times=1
I would have expected the smalles…