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```
import requests
json_body = {
"url": "https://static.remotasks.com/uploads/61095caaada54100bb515474/short.txt"
}
resp = requests.post("https://api.smrzr.io/v1/summarize/news?num_sentences…
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I am hoping for some advice.
basically I want to classify my PE reads to Archaea, Bacteria, Eukaryote and Virus (d: domain with K: kingdom option being optimal) as to get an overview as to the % a…
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Dear authors,
I have been using Bracken to experiment on strain level classifications. I find the tool very useful. I do have a question regarding output. I test on reads from a gut microbiome stan…
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Hello thanks for developing this interesting tool!
I'm preparing a meta-analysis, and I wanted to explore the eukaryotic component of the microbiome with EukDetect. However, after reviewing the doc…
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Dr. Hu,
I recall seeing you present the LDM model for microbiome analyses at JSM a few year back (and Dr. Satten mention it as well). It is great to see the work now published and the excellent pe…
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**Hello,
I am running the tutorial for the -Analysis of American Gut data-.
When I transform the adjacency matrices to the igraph object, the session aborts immediately.
This happens only for th…
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Hi,
I just trying to apply _diff_analysis_ function to the phyloseq object built with picrust2-predicted pathway abundance table.
The otu-table is like this:
pathway | sampleD1-10F | sampl…
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I'm doing NMDS with `ordinate` and trying to get three axes rather than two. I see in the documentation that I can set `k = 3`. This works with the Bray distance, but not with UniFrac or weighted Un…
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**Submitting author:** @wsmets (Wenke Smets)
**Repository:** https://github.com/LebeerLab/tidytacos
**Branch with paper.md** (empty if default branch): master
**Version:** v0.3.0
**Editor:** @diazrena…
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Could someone with some guppy DB experience lend a hand here (@nhoffman, @metasoarous)?
``` sh
# `guppy classify` can build SQLite databases for easy and fast access to
# results.
guppy classify --m…