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Running GGD recipe: hg38 dbsnp 154-20210112
URL transformed to HTTPS due to an HSTS policy
--2023-02-14 16:01:32-- https://ftp.ncbi.nih.gov/snp/archive/b154/VCF/GCF_000001405.38.gz
Resolving ftp.n…
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https://docs.google.com/document/d/1p7P_Jub5OjydBwHe3wL2aCIsHemHOKVlrWwoPBC9RmU/edit
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Gene.mirna was used for 37, not used in 38. Do we still need these data? `mirna.txt` is not on the download list, so it's not being loaded anymore.
- [ ] remove mirna from [GeneParser.java](https:/…
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Seperti dijelaskan pada dokumentasi technical test, seharusnya ada fungsi untuk registrasi dengan atribut email dan password @vickyelfathea
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Hi guys,
When I run CIRIquant, `/home/justin/miniconda2/bin/CIRIquant -t 15 \
-1 /home/biodata/GSE135055/2.clean/SRR9856187_1_val_1.fq.gz \
-2 /home/biodata/GSE135055/2.clean/…
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### Biographer Bot
- [ ] relive memory: a new way to self-curate... you experience your own memory as told to you by the bot, and you enhance, bolster improve on the spot as you remember things ind…
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We use `Pair` which comes from the JavaFX package. Unfortunately this library is not available in OpenJDK anymore.
Luckily it's only used in one place, and there are very good alternatives.
As o…
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On bcbio-nextgen v1.2.9, the command
```
bcbio_nextgen.py upgrade -u skip --genomes hg38 --aligners bwa
```
results in the following error:
```
Running GGD recipe: hg38 dbsnp 156-20230320
…
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I installed recently bcbio and successfully run RNAseq experiments with hisat2 as aligner. I tried to install STAR index using hg38 but I am getting the error below, yet I do not get the same message …