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Hello, I am in the process of downloading the dataset used in the paper, but I am unable to download the train.json file for the Visual Genome dataset because the URL "https://datarelease.blob.core.wi…
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Hi Prof. Ou,
My EDTA was wrong in the TIR prediction, and the running log is as follows:
```shell
#########################################################
##### Extensive de-novo TE Annotator…
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When i use the command：./nextflow run nf-core/rnaseq -profile docker --input /home/young/miniconda3/bin/samplesheet.csv --genome GRCh37，it report the error that .
The same error when i use the comman…
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I am interested in deriving the avg_distance_to_effective_5p_end value utilizing the data from the avg_distance_to_effective_3p_end column.
Is there any plan to provide the avg_distance_to_effectiv…
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Hi,
I am struggling to workout and estimate minimal resources to run cactus for 100 genomes mammal size.
I can use CPUs, GPUs but I need to estimate amount of resource for an amount of time (project…
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Hello!
I am currently testing BacTermFinder and I have encountered two inconvenient issues which do not output informative errors.
1) When I run BacTermFinder from a directory different from the…
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### Description of the bug
Hello,
a samples.csv that was working in 3.15.1 is not accepted anymore.
The file has numeric sample ids. Prepending them with x makes it work again.
However numeric sample…
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### Description of the bug
The pipeline prematurely stops with the error:
`Missing process or function Channel.empty([[]])`
The log file says:
`Caused by: groovy.lang.MissingMethodException: N…
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As per issue #25, for some reason, the pipeline does not seem to work when integrated into the Nextflow pipeline, due to the absence of some python scripts. However, when I checked the directory conta…
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My OS/architecture info: `Linux compute2 4.15.0-141-generic #145-Ubuntu SMP Wed Mar 24 18:08:07 UTC 2021 x86_64 x86_64 x86_64 GNU/Linux`
I've tried running the following command with STAR 2.7.11b a…