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Hello, When I run `Drop-seq_tools-2.3.0/TagBamWithReadSequenceExtended \ INPUT="/home/yxtu/result/ubam/shiels_Rep_1.ubam" OUTPUT=/home/yxtu/result/taggedbam//shiels_Rep_1_unaligned_tagged_Cell.bam \ S…
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The parameters of the transform function are
```
def transform(self, X, perplexity=5, initialization="median", k=25,
learning_rate=100, n_iter=100, exaggeration=2, momentum=0, max_grad_norm=0.05)…
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Hi Team,
This concerns study: "Single-cell Reconstruction of Developmental Trajectories During Zebrafish Embryogenesis"
It seems that I can download files from the study after logging in using m…
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Hi Team!
I'm having an issue with one of my sets of cluster coordinates not displaying correctly. The affected study is: [https://portals.broadinstitute.org/single_cell/study/single-cell-reconstruc…
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I have seen two PAGA plots for the 1.3mln 10x dataset: Figure S12 in https://rawgit.com/falexwolf/paga_paper/master/paga.pdf and slide 17 in http://falexwolf.de/talks/180313_HCA_RedBox_Scanpy.pdf. The…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/dcellwanger/CellTrails
Confirm the following by e…
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Similar movements are associated with drastically different muscle contraction velocities
Paper/Hagen2017Similar.pdf
We investigated how kinematic redundancy interacts with the neurophysiologica…
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- [x] Read through Julia's draft
- [x] Make edits
- [x] Contact Kate Mills re: what she thinks is a good idea
- John's kinda done this already in person - thinks its a good idea and no need for supe…