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Some bug in the code causes the scheduler's lr to constantly go up in the training regime. Need to fix it before progressing with further fine-tuning.
Exemplary [run](https://app.neptune.ai/o/appsilo…
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Hi, flow cytometry files from Apogee don't parse with fcs parser.
They (inexplicably) have a bunch of spaces before $P1N in the header, this can be remedied without too much trouble though.
An…
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Hello Andrew,
I am the developer of the `PICAFlow` R package (https://github.com/PaulRegnier/PICAFlow) which basically serves as an all-in-one processing and analysis package for flow/mass cytometr…
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Hey folks! I've been reading more about and testing a local instance of Neurobagel. Firstly, nice work! The node was pretty straightforward to set up.
Now we've started exploring use cases, and I am …
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In GitLab by @jakebeal on Aug 21, 2019, 06:53
Each modality of measurement implies some non-variable controls, which can be automatically inferred from the measurement table.
- Flow cytometry implie…
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When the fuzzy set is very long, the calculation of size is quite slow.
The fast [arrangements](https://cran.r-project.org/package=arrangements) package might help here. Maybe the functions can be …
llrs updated
9 months ago
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Hello teammates! @eamutaigwe @Sudhaubc @maira1220
My name is Eve Chen and I'm a second-year M.Sc. student in Bioinformatics at UBC.
My background is in Biology, but I have been dabbling in data…
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Project Lead: Fabienne Lucas, MDPhD, Resident in Clinical Pathology Brigham and Women's Hospital Boston, MA, Pathology Fellow Harvard Medical School Boston MA @FabLucas
Mentor: @malvikasharan
…
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From Nathan:
Hi Ben, David, and Heather,
My name is Nate and I work with Lili at NIST in the flow cytometry consortium. I'm trying to download all the FCS files from WG2 (~2600 files) onto an analys…
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Hi, I am trying to use PARC for Flow Cytometry and I want to identify Plasma cells which is usually done by manually gating on CD38 and CD138. The gate identifies the high CD38 and CD138 population (u…