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In https://github.com/biothings/biothings_explorer/issues/774, we migrated to the new v3 Monarch API (using the [/association endpoint](https://api-v3.monarchinitiative.org/v3/docs#/association/_get_a…
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Trying to mass query all phenotypes in the KG by setting query to NULL and raising limit.
Running with limit
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Just noticed this endpoint seems to not be working:
https://api.monarchinitiative.org/api/search/entity/diabetes?rows=20&start=1
Response:
```
{
"docs": [],
"facet_counts": {
"category": {}…
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IDs for coriell are a bit weird. NIGMS-GM21992 vs coriell:GM21992
cc:@TomConlin
https://monarchinitiative.org/model/Coriell:GM21992
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This phenotype http://monarchinitiative.org/phenotype/HP_0000388
Should be linked to this disease with an identical name http://monarchinitiative.org/disease/DOID_10754
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Why does this variant associated with phenotypes
https://beta.monarchinitiative.org/phenotype/HP:0002149#variant
but this one doesn't
https://beta.monarchinitiative.org/variant/ClinVarVariant:549…
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Right now we have the following problem: patterns involving "has characteristic part of" have the same exact name as their "has characteristic" counterparts. See for example:
- https://ols.monarchi…
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We already have the ability to filter by a list of genes (virtual gene panel) which is great but not exactly what we want as ideally we want to also take advantage of Exomiser's capacity to identify t…
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request:
https://scigraph-data.monarchinitiative.org/scigraph/dynamic/evidence/HP%3A0011014/HP%3A0000118?evidence_code=ECO%3A0000204
response
{
"code": 500,
"message": "There was an error p…
goodb updated
7 years ago
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this page won't load:
http://stage-monarch.monarchinitiative.org/phenotype/FBbt:00004326PHENOTYPE
which was from the phenotypes listed on this page:
http://stage-monarch.monarchinitiative.org/gene/NC…