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What if there are multiple tumours in a multi-sample VCF. Should we try and handle this?
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Change from single line to multi-line in three spots:
- [x] Collection Event - Field Notes
- [x] Fossil Sample – Repository Information – Storage Notes
- [x] Fossil Sample – BC Fossil Identificatio…
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This RFC was re-created due to a problem with the original. Summary of comments from previous issue below.
### 🚀 The feature
**TL;DR \-** We want to lean into **modular Multi-Threading/Multi-Pr…
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Hi!
Is there a way to do somatic calling on multiple samples at once? I have multiple samples from different areas in a tumor of a patient. As part of a phylogenetic analysis, I would like to call th…
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### Description of feature
At least for v2.7.1, the output reports created by `cellranger multi` are not included in the final MultiQC report.
My command:
```bash
nextflow run main.nf \
--aligne…
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Dear Breon,
Thanks for developing this brilliant package for the community! I really like the final layout of the plot and would like to adapt it to my own project to look at the TMPRSS2-ERG fusion…
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**Date/Datetime formats**
* when `--infer-date` is enabled, `format` should be set to the format used
* for all Date/Datetime columns, on the last pass right before displaying results, it will chec…
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Hi, team, I would like to know how to load and dump a sharded embedding collection via `state_dict`. Basically
1. How many files should I save? Should each rank have an exclusive sharding file or o…