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I'm currently using `MsBackendHdf5Peaks` backend to load several `mzML` files simultaneously:
```R
fls
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### Basic information
* My operating system: Windows 10
* My mzmine version: 3.3.0
### I have followed these steps in sequence for mzML files.
Mass detection, ADAP chromatogram builder, chro…
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All have maps, but GFF is converted ok into a polars df, but not the latter to.
* Genbank: List of structs... overall quiet complex :/ https://github.com/wheretrue/exon/blob/b2726a591294ff9b0b45e66…
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**Is your feature request related to a problem? Please describe.**
I have some data that have a bad mass calibration but still need to use it for analysis. For full transparency in publication and p…
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Hello,
I'm trying to run PbfGen on this mzML file, and getting the error "An item with the same key has already been added". Could you help me understand why and how I might fix this?
https://ww…
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```
What steps will reproduce the problem?
1. Try opening this file:
http://ms.cs.umt.edu/data/mouse_5500_7250_600_637.mzML
What is the expected output? What do you see instead?
The expected outp…
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['F:\\Sara\\fragpipe\\jre\\bin\\java.exe', '-jar', '-Dfile.encoding=UTF-8', '-Xmx20G', WindowsPath('F:/Sara/fragpipe/tools/MSFragger-4.1/MSFragger-4.1.jar'), '--generate_expect_functions', 'DQB2-notry…
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I've been using RaMS for about a year and it is amazing; finally an easy depencency-light way to fast reading and tidy manipulation of MS data! My feature request is could there be a way to label dif…
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Hello Digital Proteomics team,
I would like to ask about the MzMLChromatogramStAXParser. I am currently trying to parse through Chromatogram tags with the dp-mzml library, however, I keep getting n…
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Currently it's really, really awkward to deal with the case that we have several substances measured e.g. once each, but at different collision energies. Either I have to put an unspecific entry in th…