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# The goal
I'd like to improve Bdv-Playground and make it capable of handling really big data with low RAM.
# Why it's not ideal currently
It's doing ok, but it sometimes fails because some …
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Hi,
I want to convert ome.tif files to zarr using recOrder.convert, but a key error is produced. I have never encountered this error and am using the usual recOrder.converter command. Do you know w…
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We will need a couple of spec updates to support spotSources etc. They will also require rewriting of the old spec because we will change the table layout a bit (and some potential other changes, see …
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bump the tif-to-zarr conversion from 0.2 to the latest stable version (0.4.0).
currently using this image (https://hub.docker.com/layers/bioformats2raw/openmicroscopy/bioformats2raw/0.4.0/images/sha2…
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```
$> dandi --version
0.39.4+2.gb73f44d1
(dev3) 1 21468 [1].....................................:Thu 28 Apr 2022 06:08:44 PM EDT:.
lena:/tmp/test
$> dandi validate-bids sub-MITU01/ses-MR/sub-MIT…
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## 🐛 Bug
The function `_raw_to_displayed` may raise an exception when called with a Dask array and direct color mode.
In several places in Napari, Numpy and Dask arrays seem to be used interchan…
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Hi,
I am trying to convert a single image to ome.tiff. I tried tiff and jpeg formats but the conversion constantly fails. The image has the following properties:
```
Colour Model: RGB
Depth: 8…
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@constantinpape @K-Meech @KateMoreva
`Plugins › BigDataViewer › OME ZARR › Open OME ZARR From File System...`
with
`/g/cba/exchange/ome-zarr/2022/lifdata1__bf2raw-0-4-0.zarr`
gives
``…
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Raw intensity images should be saved in the zarr store, in case we decide to process the data differently at a later point
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Current decisions:
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* New pipeline (recOrder/waveOrder) won't support MM 1.4.22.
* We will save data in performant multi-page/ND image formats: ome.tif for acquisitions with mm2-…