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Hi,
I'm not sure how megahit count kmers in the overlapped region of paired reads. Does megahit count these kmers as 1 or 2?
I've noticed that if we just count the kmers of two paired-ended read…
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Usually, countReads works well. But when I used it for some bam files from the other, I had a problem as below:
**command**
mc
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Twin primes are pairs of primes that differ by 2. Currently the twin prime counting function, which counts the number of twin primes less than a given x, is not implemented in Sage, Mathematica, or…
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I'm trying to replicate read pair assembly that I've tested with `usearch` and want to replicate with `vsearch`. In the [`usearch`](https://www.drive5.com/usearch/manual/merge_options.html) documentat…
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Hi,
I am trying to run rmats in the HPC. I installed rmats in a new rmats environment in conda.
I activated conda and the environment, but somehow I just can't run it. I got several errors.
I f…
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When running metaspades on a paired-end FastQ files with error correction enabled, `spades-hammer` process through counting the k-mers on the forward reads, but gets stuck on doing the same on the rev…
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Unbalanced `|` inside a comment:
```lisp
;; |
(defun foo (
2
```
Maybe similar to the "dangerous quotes" problem with an unbalanced `"` in a comment, but I think this one could come up more of…
gilch updated
2 weeks ago
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Discussion to address https://github.com/mirnylab/distiller-nf/issues/96.
Since there is `pairsamtools restrict`, we can use that as a starting point for adding fragment-level stats. But after some t…
Phlya updated
2 years ago
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**Issue by [mitzimorris](https://github.com/mitzimorris)**
_Tuesday Oct 31, 2017 at 18:22 GMT_
_Originally opened as https://github.com/stan-dev/stan/issues/2431_
----
#### Summary:
add type `tupl…
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Reading lines...
Read 141382 sentence pairs
Trimmed to 11132 sentence pairs
Counting words...
Counted words:
eng 2953
fra 4540
start training...
Traceback (most recent call last):
File "tra…