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Hi,
I have a problem with the systemPrepare function since I installed the new version. When I switched to another environment which still had an older version of HTMD installed the error did not o…
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# Aim
Define the structure of the database that IDPConformerGenerator needs to read and mine in order to build the conformers.
This database represents the file or structure that stores the whol…
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I used "trinotate_report_summary.pl" to generate a "cXp_summary.html" file, however, this html file shows up blank when opened in Google Chrome or Firefox.
Why?
and, here are the contents of the…
ljyls updated
4 years ago
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This is an excellent package for running AlphaFold that allows an impressive level of control over msa and template use. However, it is very easy for runs to fail owing to file names being too long as…
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### Version
all versions including latest git master
### Operating system type + version
Linux
### Behavior
Generation of support material especialy for two extruder setup may take very long ti…
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@tabbassidaloii and me have been checking the issues with the xref batch query.
Issue reported by @egonw:
```
https://webservice.bridgedb.org/Human/xrefs/S/O14494?dataSource=L
```
this seems t…
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Greetings!
Thank you for releasing the code of the paper 'A Latent Diffusion Model for Protein Structure Generation'. I was wondering if you have planned to release the trained weights and if so, …
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Hi all,
Thank you very much for your hard work; this is a beautiful thing. I have two questions that I'm trying to address simultaneously.
1) I am trying to design a small binder (8-20 resi) int…
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Hello,
I am writing to inquire about the capabilities of the ProteinGenerator tool, which I came across in your recent publication: "Joint Generation of Protein Sequence and Structure with RoseTTAF…
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I am wondering what the meaning of "Crosslink satisfaction" is and how we might be able to interpret this. We have a dataset with multiple different crosslinkers, therefore some XLinks have different …