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### Is there an existing issue for this?
- [X] I have searched the existing issues
### Describe the bug
The text is overlapping on the home page making it unable to read the words.
### Expec…
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Hi, I'm looking at a transcript with a shorter an longer version of an exon.
I was wondering how you count reads for those peaks?
Like reads that map partially to the shorter exon but fully to t…
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Hi,
we recently sequenced a batch of 19 fungal isolates. I tried to assemble the genomes a few different ways (simplex + duplex or simplex corrected only) in order to figure out if there is still a…
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CoverageBed counts more reads overlapping with peaks than the number of peaks overlapping reported by clippers internal count.
I'll Investigate this
@mlovci is there something with the read counting …
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When `method=datashader` is used the colors that are produced are wrong. Strangely the colorbar is correct. Initially I though this was due to the choice of the `agg` function when each pixel of the r…
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It seems that the genotype likelihood calculation used by HaplotypeCaller ends up double-counting fragment evidence when the variant is covered by both reads in a read pair. For a homozygous call, thi…
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This ticket proposes two separate but overlapping ideas.
### 1. When trying to write/read Zarr files, throw an informative error if the user does not have `zarr` installed
just as Xarray does …
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When calculating depth by GC content, samtools stats command ignores reads overlapping boundary between two GC bins. For short read data, it doesn't matter since, as explained in [stats.c](https://git…
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### Is your feature request related to a problem? Please describe.
In Hummock, excessive sst can lead to read performance degradation and deteriorate compactor performance, so we introduced the conce…
Li0k updated
2 months ago
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Concerning VK_EXT_attachment_feedback_loop_layout:
As far as I understand it, the only supported way to have feedback loops is to transition the image to `VK_IMAGE_LAYOUT_ATTACHMENT_FEEDBACK_LOOP_O…
K0bin updated
3 weeks ago