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Hello
Thank you for developing this great and wel document package.
Wondering if `EnrichmentBrowser` can use scRNA-seq data input? If so, how would you recommend doing this? I am especially wo…
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Thanks @marcelm for maintaining such a useful tool!
Regarding the relatively new poly-A trimming feature - would it be possible to toggle strandedness?
By default you consider R1 to have the po…
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Dear sir:
Hello, I used the drop SEQ process to analyze the single-cell transcriptome data and used star for comparison, because the single-cell transcriptome r1.fastq in drop SEQ is barc…
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Hi, @kaizhang . Thanks for developing SnapATAC2. When I was running the anndata.concat function in the "Annotating cell clusters by integrating single-cell RNA-seq data" tutorial, an error occurred "A…
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Thanks you for developing snapATAC tools,
and i have a question:
I followed the "Integrative Analysis of PBMC scATAC-seq and scRNA-seq" pipeline.
1. drawing the prediction score in histogram…
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![Schematic_of_a_typical_single-cell_RNA-seq_analysis_workflow](https://user-images.githubusercontent.com/78339135/134680696-4a7deb04-cf37-4915-8996-70aa389c4403.jpg)
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@rob-p @robsyme @DongzeHE
I have BD (Becton Dickinson) single-cell RNA-seq data that I want to align. Can I do this with `simpleaf`?
Thanks
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https://hutchdatascience.org/Choosing_Genomics_Tools/single-cell-rna-seq.html has an error -- "Full length..." slide is duplicated
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### Description of feature
Hello, thanks for the great work with this pipeline. I would like to try to use this pipeline to call somatic mutations in single cell rna-seq data. I have my own WGS refer…
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deng老师您好:
我在阅读您的文章Polygenic regressionuncoverstrait-relevant cellular contexts through pathway activation transformation of single-cell RNA sequencing data时,发现图3E和图4A是同一套 BMMC scRNA-seq 数据。然而,图…