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Hello Sir/Ma'am,
A very convincing normalisation approach well explained in the paper.
So we have the allele specific read count from Single-cell RNA seq data without a…
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### Task motivation
Gene Regulatory Network (GRN) inference is pivotal in systems biology, offering profound insights into the complex mechanisms that govern gene expression and cellular behavior. Th…
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Hi,
I have data obtained from two different single-cell RNA-seq platforms:
* **icell8**: **specific cell type** obtained by flow cytometry
* **10x**: **all cell types except the above**
Now,…
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I noticed starsolo was designed to work in many different platforms of scRNAseq, e.g. 10X/Indrop/SeqWell. However, I don't find the corresponding category for single cell combinatorial indexing RNA …
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**LAST EDITED: Aug, 29, 2024**
See parent Epic for further information.
https://github.com/chanzuckerberg/single-cell/issues/644
See current draft for spatial support in SOMA https://docs.goog…
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Dear developer,
Many thanks for the great tool! It will be very impactful for the community as shown by its application to the Zanzibar dataset.
Is it possible to adapt the tool to estimate relate…
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Hello,
I'm analysing single-cell full-length RNA sequencing data. I would like to perform an analysis on alternative splicing exons, which has been mentioned multiple times in your research group's…
weib3 updated
5 months ago
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Thank you for your very helpful package. A single cell RNA sequencing experiment was done in my lab some 3 years ago on cells that were sorted and treated with a profibrotic agent. I wish to see if th…
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**Description of the issue**
As per the message left by Jason [on slack](https://humancellatlas.slack.com/archives/CACM2JCMS/p1697485256722649?thread_ts=1697485243.091859&cid=CACM2JCMS), there are a …
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Hi there, thanks for this helpful package!
I am integrating single-cell RNA-seq and ATAC-seq data where one cluster is missing in one dataset, so the sizes of the two datasets are different. I can…