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For processing and plotting of the data from the SATAY experiments, typically many different files need to be combined.
To make this a bit easier, [the python script 'genomicfeatures_dataframe_with_…
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**Problem**
getRelativeGenomicPosition returns 'unknown' for the chromosome for a large interval at the end of the chromosomes due to CHROM_SIZES missing unaccounted intervals.
**Example used**
`…
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Is there a way to adapt the pipeline for nonhuman organisms?
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Please describe:
1. What you were trying to do
I'm trying to find bubbles in an assembly graph by running vg snarls (version 1.15.0). There are some snarls that I don't understand. Here's a pict…
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We need a consistent way to talk about length related terms. In the editors call on 6/3/21 we decided to create a pattern for abnormal length along axis.
Minutes of discussion are here: https://doc…
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Hi,
First,
I am wondering the step:
` Finally, the HiFi and short reads were combined to polish the ONT assembly. `
What software did you use to polish the genome?
Second,
what are the sequenc…
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Hello,
I am running `pyrho` v0.1.7 to get recombination rates of hybrid species and their parentals. We are using whole genome resequencing data (vcf files of biallelic SNPs), with 25 individual. T…
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# W, 20141203:
Emailed Michael after getting OK from Gopi:
> Hi Michael,
>
> How much trouble would it be for you to send the on-going FBIRN phantom acquisition to our dicom receiver (telomere)?
> …
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Add links
- [x] Intro to Primer navigation
- [x] Section 5
- [x] Section 6
- [x] Section 7
- [x] 7-1
- [x] 7-2
- [x] 7-3
- [x] 7-4
- [x] Section 8
- [x] Section 9
- [x] Sect…
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