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Hi @lpryszcz ,
First, congratulations for your program / wrapper. It's the first that I found that it can be installed, run and the output is almost what I need. You would be surprised of how many …
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We need a descriptive definition for the [Gene Type](http://bio.sdo-bioschemas-227516.appspot.com/Gene)
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Hello all,
I am assembling my first illumina genome. It is a bacterial genome about 2.5 MB in size. genus Ignatzschineria.
FastQC shows the following stats for the R1 and R2 reads:
File type-…
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Ok. It is worked. The script continued to the next stop. It look like that import scikit-learn should add it to FeatureValueTableConstruction. What more do you see? Thanks
sudo python3 ./Pipeline…
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Here are some possible benchmarking scenarios for the Unipept API
- analyse metaproteomics data sets (use sample data sets available from the Unipept website)
- analyse shotgun metagenomics data sets …
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Hi,
I found the following command not work
wget https://ftp.mi.fu-berlin.de/pub/dadi/slimm/V_genomes_indices_20180924_bowtie.zip
$ wget https://ftp.mi.fu-berlin.de/pub/dadi/slimm/V_genomes_i…
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Hi, I'm trying to run Prodigal on some assembled genomes and I get this message:
`Error: Sequence must be 20000 characters (only 13949 read).
(Consider running with the -p meta option or finding …
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Hi, novice Linux user here.
I work for the CDC and our scientific computing people have installed CATCH on our biolinux platform. I have loaded CATCH and was trying to run the line of code to have…
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These human host genomes have `virus.fasta` as their fasta path but their actual path is `virus/[0-9a-z]+.fasta`
```
alethinophid_reptarenavirus
amapari
ambe
bear_canyon
bwamba
cao_bang
cara…
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Hello,
I don't have enough memory on my computer for automatic database download (64Gb), I've downloaded it manually but the files seems to be too large (the docs says it use approximately 30Gb). Cou…
fetyj updated
5 years ago