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> 1. This count also looks a bit odd, Val? I would assume that number conserved in fungi will be ≤eukaryotes
> but cdc2:
> conserved in fungi
>
> 4564
> conserved in eukaryotes
…
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Easy to fix issue with the way you are handling the individual hmmscan jobs..
The command:
```
dammit annotate Mytilus.fasta \
--user-databases /mnt/data3/macmanes/dammit_databases/tcdb.fasta /mnt/…
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I just got really confused by the vacuole terms that replaced the sensu terms.
membrane of vacuole with cell cycle-correlated morphology
has the synonyn
vacuolar membrane (sensu Fungi)
so I thought …
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Sent in email to JAR on 2014-01-30.
1) Chaetognatha should be in Protostomes
2) Platyhelminthes should be in Protostomes and Lophotrochozoa
3) Myzostomida should be in Annelida and Polychaeta
4) Gnat…
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When someone uses the API to get phylogenetic information such as a subtree or subtended tree, it's important to relay the sources of that information, so that they can (a) check it (b) learn more (c)…
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Hi,
Please may I have a new process term:
GO:new acrosomal matrix dispersal
PMID: 10418103
acrosin is involved in acrosomal matrix dispersal
after acrosomal reaction
P10323
cheers
Evelyn
Reporte…
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The code for the improvement was finished in #209, now all that is needed is a subset with the name "model_slim", either as a separate ontology on in the taxon slim. Changed to over here to reflect th…
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Hi David,
I'm trying to run OF on a large dataset. Because of the size (191 spp) I performed the all-by-all blast manually as a series of job arrays on our research cluster, and am now using the -b o…
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as discussed with @dimus -
In addition to taxon hierarchies, suggest to include available common names for resolved taxa. This would help me immensely in making the search features in http://globalbi…
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Does anybody have any preference about the wording of sensu
definitions? Some currently end:
... as in flowering plants
or
... as in Magnoliophyta
I'd be keen to know which is favoured between la…