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Hi Taruna
I am following your protocol and when I am in the 2nd step (pick OTUs)
In the parameter for picking OTUs you wrote
assign_taxonomy:reference_seqs_fp /home/gomre/taruna/GOM-Illumina/r…
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Hi BiG-MAP developer
Thanks for developing the tool for the community.
I ended up with an error when running BiG-MAP.map for both metagenome and metatranscriptome data. One error example is lis…
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Hello,
I tried to run ./set_picrust.sh
and got the following error:
Solving environment: failed
ResolvePackageNotFound:
- python[version='>=3.5,=0.24.2,=3.1b2,=2.1.7']
- gappa=0.5.1
…
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Hi all,
When I tried to run the "download_picrust_files.py of picrust", I got the following error:
Traceback (most recent call last):
File "/home/qiime/miniconda3/envs/picrust/bin/download_pi…
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What's the recommended way to visualise the mash output files from the screen command?
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Thanks to the [`edit-ro-crate.py`](https://github.com/emo-bon/MetaGOflow/blob/eosc-life-gos/utils/edit-ro-crate.py) script we now have descriptions for the RO-Crate that the wf returns; see #18.
Ho…
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This function is currently converting sparse bioms to a dense representation.
https://github.com/biocore/rhapsody/blob/master/rhapsody/util.py#L111
This maybe problematic when scaling these algori…
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Hi,
When you have this:
[good.txt](https://github.com/biocore/biom-format/files/5957980/good.txt)
it'ok
When the order of metadata is different :
[bad.txt](https://github.com/biocore/biom-format/…
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Trying to execute the 16s workflow via docker. From the documentation it sounded like only `usearch` would be missing due to its licensing issues, however it seems that `vsearch` is also excluded fro…
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Dear developers of Phinch,
I forked your project to https://github.com/iimog/Phinch
By now quite some changes have accumulated:
- All browsers are allowed (original project only allows Chrome)
- BI…
iimog updated
7 years ago