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Hello there!
Thank you for developing DRAm, it is a great tool and I've enjoyed playing around with its functionalities, in particular, with DRAM distil. I managed to generate nice visuals using …
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Please complete this report in full and as much detail as possible. It will help with getting the bug fixed far sooner!
## Describe the bug
Error downloading database
## To Reproduce
Please in…
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New Datasets / Requires new object in dataset-masterlist.json:
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- User Submissions (Kate)
- Carbbank (Urnisha - Karina as backup)
- PRIDE xref dataset (Kate)
--> Find triples with "PRIDE…
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Please complete this report in full and as much detail as possible. It will help with getting the bug fixed far sooner!
**## To Reproduce
Please include the specific steps (including all code) you…
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Error occurs when trying to retrieve the tax ids from NCBI for adding taxonomic information to the 2 output tab delimited lists when running the get_dbcan_cazymes command on the St Andrews Kennedy Sup…
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Hii @linnabrown and @yinlabniu,
I have a small and quick question. On the http://www.cazy.org/Home.html webpage, the authors mentioned that "_in the end of 2023, we released on CAZy.org our expert …
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Hello, I ran this command to functionally annotate 553551 amino acids sequences.
`metacerberus.py --amino SAIN23-1_MAGS_ASSEMBLY_SUBSET_553531.faa --hmm "KOFam_all, COG, VOG, PHROG, CAZy" --dir_ou…
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Hello!
First of all, thank you very much for this great tool.
I have just updated run_dbcan to version 4.1.3 (I am using biocontainers/bioconda version) and I am running into an error which it …
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I got a strange error in step-10.
Here is my line of code to run MetaCerberus:
```
source ray-slurm-metacerberus.sh
metacerberus.py --prodigal data/processed/final_MAGs/all_final_MAGs/fixed_names …
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Create BCOs for all new datasets
**Dependencies:**
* #1450
* #1455
* #1479
* #1493
* #1494
* #1495
* #1467
* #1497
* #1498
* #1499
* #1496
* #1500
* #1501