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Dear authors
Can you kindly share the complete cap selex datasets that are used for training for reproducing the analysis performed in the manuscript.
Thanks in advance.
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I downloaded all non-_K. pneumoniae Klebsiella_ data from v0.1.
I used the equivalent of the v0.2 species_calls.tsv.gz file to identify all _Klebsiella._ I then stripped out the species I didn't wa…
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Hello @carpedm20 ,
Thanks a lot for this nice implementation of the ENAS paper. Did you manage to reproduce their results by retraining the model from scratch?
Thanks,
Best
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This issue documents an investigation into performance improvements for the clustering for the [ENA (INSDC) dataset](https://www.gbif.org/dataset/d8cd16ba-bb74-4420-821e-083f2bac17c2) to vouchered spe…
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It is sometimes the case that individuals that appear in the janno of a package do not appear in the ENA table for the package (if, say, some of the data was not properly uploaded to the ENA), or vice…
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All ENA objects receive a unique PID (accession), but are also connected to several others (e.g. an experiment is linked to a study and to a sample). As a user, I want to see all related ENA accession…
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Hey there - I was just wondering if you have plans to index other databases for metagenomics reads as I feel our lab's meta-analysis efforts have definitely been biased towards the SRA. We've already …
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hi, I encountered an ena-ftp download problem, that is, the fq file I downloaded is missing base values, all of them are?. But I switched to prefetch, which is normal. Has anyone ever encountered this…
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Zkusit vzorek AED_106 (https://amtdb.org/sample/AED_106) prohnat pipelinou a porovnat výslednou mtDNA sekvenci s tím, co máme v databázi. Raw data vzorku: https://www.ebi.ac.uk/ena/browser/view/SAMEA1…