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- Phasing with WhatsHap
- Run Merqury on lamphoris, tiliqua and bassiana with long-read data to get more context around the evaluation results
- Finish up first draft of NF pipeline before bre…
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### Description of the bug
Hello,
I am trying to run nf-core lint on my pipeline, but I keep getting an error message about no nf-core modules found. However, I do have modules from https://github…
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This shouldn't be possible:
merqury_QC is a collection output (and it's not mapped over).
If you do look at a report generated with this you'll see
because we send `undefined` as the …
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would it be possible to add the multiple child data for a assembly. Such as we have the maternalreads in sample1.fastq.gz and the paternal reads in the sample2.fastq.gz and the child1 as child1.fastq.…
ghost updated
4 months ago
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- Mercury
- Phasing
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Hello and thank you for the excellent tool. I am planning to run hifiasm in trio mode and I noticed that most of the documentation and other people's examples use yak to count k-mers of length 30 or 3…
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Dear Author,
I hope this message finds you well!
Firstly, thank you so much for developing the wonderful tool, It helped me a lot on the gapless genome assembly.
I found a problem in the recent g…
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Hello, my spectra CN plot cut a peak in the last third. I would like to remake it and give instructions for the x-axis. Is that possible? I mean is there a script I can rerun by changing a number? How…
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Hello,
Thank you again for the excellent tool. I am assembling a genome where I have a good estimate of the genome size already. As such, I can use your merqury/best_k.sh script to see what I shoul…
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Hi,
Thank you for this impressive tool, I am very excited to try it!
I am not sure about which set of contigs to choose for input. If I understand correctly HapHic takes care of the collapsed c…
jolbi updated
5 months ago