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aaranyue
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quarTeT
A telomere-to-telomere toolkit for gap-free genome assembly and centromeric repeat identification
http://atcgn.com:8080/quarTeT/home.html
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Input genome does not have valid gap
#37
yghyghyghyghygh
closed
1 month ago
2
使用GapFiller模块
#36
yghyghyghyghygh
closed
1 month ago
2
Advice for "-l" parameter setting
#35
V-JJ
opened
1 month ago
2
Centrominer candidate file fields meaning
#34
V-JJ
opened
1 month ago
0
The difference between join and fill mode?
#33
Marison-1
closed
2 months ago
1
Gap filling problem,gap seems still exist after the program finished?
#32
Marison-1
closed
3 months ago
0
[Usage and inputs for Quartet] What assembly should be used in input?
#31
Isoris
closed
2 months ago
6
Inquiries about TeloExplorer and CentroMiner
#30
OZTaekOppa
closed
2 months ago
4
What sequence should I use to visualise the centromere
#29
shehongbing
closed
2 months ago
1
Potential Centrominer improvements using proximity to telomere scoring, and gene annotation
#28
colindaven
closed
2 months ago
2
Assessing the genome after filling the gaps showed that qv values are reduced
#27
doubleHwithT
closed
2 months ago
1
which is the output result of TeloExplorer.
#26
yangyyhh
closed
5 months ago
0
Confused about CloserScore
#25
Bank-tidy
closed
2 months ago
2
关于quarTeT telomere的结果文件 telo.label.txt
#24
Threeman8
closed
6 months ago
7
[Error] No gap can be closed
#23
Bank-tidy
closed
2 months ago
4
added maximum TR length parameter for trf
#22
atotickov
closed
7 months ago
4
How to estimate the CloserScore!
#21
bioinformaticspcj
closed
2 months ago
1
how to figure the output of centrominer
#20
XiaoTW123
closed
2 months ago
2
endless slurm work problem
#19
cyycyj
closed
2 months ago
14
着丝粒可视化bug
#18
btrainee
closed
2 months ago
3
How AssemblyMapper ensure the genome is complete.
#17
xiekunwhy
closed
2 months ago
1
png输入问题
#16
zongzone
closed
2 months ago
2
"Np.contig_map_ref.gp", line 40733: unrecognized option - see 'help set'.
#15
wangjie07070910
closed
2 months ago
3
在网站使用发生如下错误，不知如何修改
#14
jiangshuyang123
closed
2 months ago
4
Could I generate haplotype-resolved assembly using AssemblyMapper?
#13
hui-liu
closed
11 months ago
1
what do the parameters "--fillonly" and "--joinonly" mean?
#12
hui-liu
closed
11 months ago
1
Three problems for using quartet program
#11
zhenwenliu
closed
2 months ago
3
有多个填充数据时GapFiller会选择identity值最高的吗?
#10
XXH123a
closed
11 months ago
1
能够提交数据但最终结果是空的
#9
XXH123a
closed
11 months ago
6
Flanking sequence contains gap
#8
yangchouxianyu
closed
2 months ago
8
question about CentroMiner
#7
Henry-Ding
closed
2 months ago
3
usage issues
#6
zhangwenda0518
closed
1 year ago
3
FileNotFoundError: [Errno 2] No such file or directory: 'tmp/sx_tm.txt'
#5
HaoWenhy
closed
2 months ago
5
FileNotFoundError: [Errno 2] No such file or directory: 'tmp/sx_tm.txt'
#4
HaoWenhy
closed
1 year ago
1
Upload genome files to the website
#3
hushaoqiang
closed
2 months ago
16
About references guided assemble
#2
xiekunwhy
closed
2 months ago
2
Setting of the Telomere parameters
#1
Wenwen012345
closed
11 months ago
9