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Hi,
Thanks for the great tool on nanopore data assembly benchmark. I ran a dataset and it failed on mulitqc step which compliant about the tempate invalid.
```
Error: Invalid value for "-t" /…
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### Context
We are using [MultiQC](http://multiqc.info) to generate QC reports for the RNA-seq pipeline (#205). MultiQC generates HTML files (example [here](https://github.com/AlexsLemonade/refineb…
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Hi, I'm getting an error in the multiqc step of the workflow when running it with the ecoli test dataset.
Here's a snippet of the error:
```
Error in rule multiqc:
jobid: 1
input: re…
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While generating the reference healthy gut dataset (844 samples at once) for this microbiomics pipeline, the MultiQC step failed due to lack of memory. The retry failed as well.
```
Error executin…
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Dear,
I am facing a problem using the docker image. Can you help me?
I use this command:
docker run -v $(pwd)/Samples:/msPIPE/data:ro -v $(pwd)/ReUsableDatabase:/msPIPE/reference -v $(pwd)/Work…
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It would be good to add MultiQC as an optional step:
* **Main Website:** https://multiqc.info/
* **GitHub Repo:** https://github.com/ewels/MultiQC
* **Documentation:** https://multiqc.info/docs/
…
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Depends on this working: https://github.com/ewels/MultiQC/pull/1111
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Hi there,
Depsy doesn't seem to be able to find MultiQC, a package on PyPI.
https://pypi.python.org/pypi/multiqc
https://www.github.com/ewels/MultiQC
http://multiqc.info/
I tried fudging a url with…
ewels updated
7 years ago
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assembly metrics with QUASt
multiQC too?
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The inspect command reports the container used during a pipeline execution, for example:
```
» nextflow inspect . -profile wave
{
"processes": [
{
"name": "RNASEQ:INDE…