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The ObjectClassification class was originally intended to handle informal (and potentially hierarchical) classifications, such as the high-level classification used by the SYNTHESYS+ Collections Digit…
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Check for changes in taxonomic classification during time series.
# Approach 1
Ask data providers/ managers if, e.g., one group of organisms used to be ID'd to just Genus, but now to Spp. Etc.
# Appr…
rBatt updated
8 years ago
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Original Issue reported by Project Member Reported by john.t...@austmus.gov.au,
Jul 9, 2012 - https://code.google.com/p/ala-bie/issues/detail?id=374
Project Member Reported by john.tann@austmus…
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Hey,
May I know what are the recommendations to properly credit various parties for data in MIxS standard? e.g.:
- personnel involved in sampling
- software/tools/reference databases used in taxo…
ymgan updated
8 months ago
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`Confidence score`: the proportion of k-mers mapping to a taxon, the default value is 0. A taxonomic classification is only taken if it is above this pre-defined threshold. Therefore confidence thresh…
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@cgendreau created a data model for holding multiple classifications for a single DINA instance. Can folks review in the context of the [taxonomy use cases](https://github.com/DINA-Web/dina-use-cases/…
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We need to remove the limitation on "size" of a taxonomic hierarchy to be printed. The system doesn't seem to have any trouble displaying any, so let's display any requested. Right now, it often says …
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A quick glance through the species suggests that TRASH and other categories are still included. A careful look through SCINAME and COMNAME would be good.
Should also decide whether to include taxa …
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Related to #12, we don't have any taxonomy use cases that involve searching for taxonomic information, either via and API or via a search box. The closest is [use case 15](https://github.com/DINA-Web/…
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@mbjones and I had a chat about how this EML dataset description was annotated: https://search.dataone.org/view/https%3A%2F%2Fpasta.lternet.edu%2Fpackage%2Fmetadata%2Feml%2Fedi%2F252%2F3.
Specifica…