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```
hh-suite commit ID b1aa73afae4811c7
Operating system: linux, compiler: gnu 4.9.2
```
Hi,
When using both pdb and pfam:
`hhsearch -d /home/ucgajhe/levine/databases/pdb70/pdb70 -ssm 4 …
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### Bacterial Quorum Sensing and Microbial Community Interactions
_DOI: [10.1128/mBio.02331-17](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5964356/pdf/mBio.02331-17.pdf)_
- Introduction:
`…
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This issue contains monthly updates to an automatically ranked list of PubMed papers as candidates for curation in the Bioregistry. Papers may be relevant in at least three ways:
(1) as a new prefix…
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Hello,
I am not clear what 'translation factor activity, nucleic acid binding' versus 'translation repressor activity, non-nucleic acid binding' are supposed to represent.
* GO:0045183 transla…
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`Glycosylation` is mapped to `transferase activity, transferring glycosyl groups` (`GO:0016757`).
This needs to be changed to `protein glycosyltransferase activity` - which have been requested by @…
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Hi Taoliu,
I am comparing two transcription factor's peaks. I analyzed unique peaks, meaning peaks that had no overlap (0 overlapping bases) between the two TFs. I was also interested in differenti…
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Hi.
Would it be possible to have the Sequence Ontology terms in NOCTUA, so we could use them in the models?
Thanks,
Jesualdo
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Propose to add a new term to annotate C. elegans genes to a more specific child of 'Wnt signaling pathway' (GO:0016055) for the cell fate specification pathway in the early embryo that combines elemen…
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Currently, this only ranks through PUBCHEM's API. It would be nice to use other APIs to rank compounds. Then probably rename this project too. We would have to discuss how other databases are implemen…
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The MotifFeatures.gff file has been renamed for Ensembl version 89.
We should update to Ensembl 90 as this will fix this and another problem.
However, they have split this file into chromosomes for…