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Hi Folks,
I am using MOFA2 for integrating proteomics targetted, untargeted, and metabolomics datasets with a sample size of approx 500 to 800 depending on different combinations. I have normalized…
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Hi Rick
I am running untargeted metabolomics on a 6545QTOF using patRoon/OpenMS and XCMS for feature extraction.
Compared to XCMS, OpenMS is not giving good results, i.e. integrating noise and ret…
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Hi,
I tried to process metabolomics data and met followig error:
`Error: There was a problem finding spectrum IDs within header file for this data. Error occured after function 'dissectScans'.
`
…
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Error message Slurm:
Slurm Job_id=2860387 Name=13-excelExport_RES_PL_20200716_Diagnosis2017_RUN4 Failed, Run time 00:17:15, FAILED, ExitCode 1
Error message in log (logs/13-excelExport/exp.e)
```…
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Hi , I am trying to understand the mmvec tool, but a quick question can we use this tool with shotgun based metagenomic data with metabolomic data?
If yes, do i need convert them into biom file or is…
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### Description
As a user, I would like to be able to align and annotate semi-targeted and non-targeted metabolomics data spectra
### Objectives
- [ ] Implement a `RawDataProcessor` method that wraps…
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after doing reverse etl, and portal etl on the new dataset file view I'm getting the differences listed below between the live merged table (prod), and the test merged table. These are not attributes…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/sipss/AlpsNMR
Confirm the following by editing ea…
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Hello!
I successfully installed your tool and ran the following example from your manual:
```
expBATCH(D=Breast,batchCL=batchBreast,Conf=NA, mindim=2, maxdim=9,method="ppcca", SDselect=2)
```
…
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Hi Craig
I am using msconvert (default settings) to convert Agilent QTOF data to either mzXML or mzML.
Both formats give the following error when executing EICparams()
Currently on sample 1
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