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# Click through:
1. Suppose you are starting at a BRC-analytics page listing available genomes:
2. No…
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Dear Han,
We are running a large meta-analysis and have collected intermediate files from several cohorts. I realised however that SMMAT.meta fails at the following check at specifically multialle…
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### Description of the bug
Dear @FriederikeHanssen,
I am experiencing problems running Control-FREEC on my WXS data from matched normal/tumor samples.
I have used sarek on the same samples to perfor…
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# protocols.io
Both Atlas of Variant Effects and the IGVF consortium (and others) are making a bit push to encourage people to use [protocols.io](https://www.protocols.io) to share their detailed p…
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Hi, thanks for your interesting tool!
I have been using cTWAS on a few datasets, and have got interesting results.
Overall, I have been able to run most parts of the analysis relatively smoothly.…
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When access haplotypes data, there are cases where there are no data for a given sample set and analysis, e.g., for the "arab" analysis where a sample set has no arabiensis samples. Currently the appr…
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Trying to add cycloneDX to an existing Gradle project. `./gradlew cyclonedxBom` produces a ton of errors of the form:
```
Could not resolve XXX.
Required by:
project :
> No…
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Dear all,
I would like to know if there is an "official" set of VCF and bed files for _NA24385_ _(HG002)_ structural variants benchmarks, which has hg38 as a reference, similar to those reported in h…
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Android has many unique formats such as:
- DEX
- OAT
- ART
- ODEX
- Other binary XML formats
We need to get a good handle on what these are and how they relate to the other formats to decide aht to d…
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Hi,
I am currently evaluating Spectre for CNV calling on some GIAB HG002 ONT data and I encountered a few issues which I wasn't able to resolve myself.
Using mosdepth I tried to create required…