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Hello,
I have noticed that with some COBRA runs, COBRA randomly aborts after "Saving joining summary of "Extended_circular" and "Extended_partial" query contigs". The log files just end there, and…
pck00 updated
8 months ago
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Hi,
I'm lucky enough to get to know Gappa. It's a versatile tool for analyzing and visualizing phylogenetic data. I want to convert a taxonomy of tab files into tree files and visualize these trees …
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Some approaches in medical genomics use the blanks to subtract the data sequenced there from the actual samples to remove background noise. Something we should also consider and could easily add (at l…
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In the README there is docker image linked to my personal repository. In the future you will be unable to update it.
docker run -it -u $(id -u):$(id -g) -v /YOUR_DATA_ROOT:/data soliareofastora/me…
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Hello, I have made my analysis with SqueezeMeta and now I want to move further using the sqm2itol.pl but I am having this error message.
could you please help with this?
Thanks
sqm2itol.pl EBFG…
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### Errors in docs/_Research-Data-Management/13-data-qc.md
* [403] [`https://www.science.org/doi/10.1126/science.aah4573`](https://www.science.org/doi/10.1126/science.aah4573) – Failed:…
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## Running anvi-split but cannot proceed because PROFILE-refined.db does not seem to have a table named `variability_splits
## anvi'o version
Anvi'o .......................................: mari…
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We have a small proportion of the samples failing the SortMeRNA step due to cluster timeouts. This step should run pretty fast, but in certain cases which we have not fully identified, it takes much …
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the latest GO file throws the following error when trying to parse it with obo.jar
` ERROR - Error while parsing Obo file
[java] org.obo.dataadapter.OBOParseException: Undefined category goc.…
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Hi I have recently moved to using a new cluster. I am using version: ipyrad [v.0.9.95] on a cluster using 20 cores
ipyrad [v.0.9.95]
Interactive assembly and analysis of RAD-seq data
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