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Dimethyl itaconate ameliorates cognitive impairment induced by a high-fat diet via the gut-brain axis in mice – Wei Pan – Microbiome
https://microbiomejournal.biomedcentral.com/articles/10.1186/s4016…
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Hi, thanks for a great package.
I am not able to generate: generate_alpha_trend_test_long - see photo.
generate_alpha_trend_test_long - error saying: error in vec_data() : ! x must be a vector, no…
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Effects of proton pump inhibitor on the human gut microbiome profile in multi-ethnic groups in Singapore – Seok Hwee Koo – Singapore Medical Journal
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC687…
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Upper respiratory tract microbiome profiles in SARS-CoV-2 Delta and Omicron infected patients exhibit variant specific patterns and robust prediction of disease groups – Shankha Nath – Microbiology Sp…
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Hi Ben,
Now I have installed dirseq and tried with the example you provided, no issue.
But when I use it for my data, I have got the following error:
INFO dirseq 24/06 12:08:52: Running comman…
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This describes the gathering of all the assemblies generated by Serratus into a single file.
TLDR: It's available at https://lovelywater2.s3.amazonaws.com/assembly/rdva/rdva_v0.2.fa.lz4
(updated 2…
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Hi,
Thank you for all the hard work with this great tool.
I successfully ran galah with the following parameters:
galah cluster --genome-fasta-directory binning/mags/setA \
--genome-fasta-exte…
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Hi, Good day, thank you for the nice package.
I have some questions on how to use tascCODA to regress covariants as age and sex in addressing the compositional changes between case and control in…
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It's missing the description for the annotations:
- [ ] language:ISO639-3:description
- [ ] language:ISO639-3:id
- [ ] language:crossref
- [ ] sub:groups
- [ ] population:genetic:study
- [ ] p…
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PandaGUT provides new insights into bacterial diversity, function, and resistome landscapes with implications for conservation – Guangping Huang et al. – Microbiome 2023
https://microbiomejournal.b…