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The `project.Makefile` in the main branch already has some code that illustrates making filtered downloads from specified collections from a specified MongoDB server. It will need to be enhanced to us…
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```yaml
id: t
license: https://creativecommons.org/publicdomain/zero/1.0/
version: 0.0.1
prefixes:
t: http://w3id.org/t
biolinkml: https://w3id.org/biolink/biolinkml/
default_prefix…
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For each ingest, we should raise an error if the totals are outside of some add some min and max expected bounds
These bounds could be set in the ingests.yaml, and the code to check them could live…
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Add lines in `import_slots_regardless.tsv` and `modifications_long.tsv` as described in the [nmdc-schema PR for adding the `infiltrations` slot](https://github.com/microbiomedata/nmdc-schema/pull/1483…
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This will be used in CI build steps
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'air particulate matter concentration' is the title for slot `air_PM_concen`
unfortunately, somehow a slot with **name** `air particulate matter concentration` was also created
I think spaces a…
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Hi robotniks. I'm facing a challenge in converting OWL to obojson, but only for an extracted subset. Starting with `phenio.owl`, I remove any problematic annotations (like `""`) then use `robot conver…
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Not sure if this is already possible with the current metamodel but it would be very helpful to be able to mark a class in a schema be equivalent to another class, where the another class is in the sa…
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**Deliverable this task is associated with**
_See Deliverables tab here: https://docs.google.com/spreadsheets/d/1lLQ3wAwJzvxujER6-b4iDnnHx06MYsDbmIBMnu1IOeI/edit#gid=0
- 1-10
**RACI**
_T…
aclum updated
6 months ago
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- [ ] Examine response of termset_pairwise_similarity, compare to biolink-api response
- [ ] Add CLI sub-app for OAK implementation
- [ ] Add LinkML class for response UI expects (unless importab…