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dear all,
i have run anvi-load-sqm.py on my SqueezeMeta outputs.
After 21:07:16 of runs , it stops after sometime and is unable to create the PROFILE.db and throws an error.
When I check the sqm2a…
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- **Poetry version**: 1.1.13
- **Python version**: 3.10.7
- **OS version and name**: fedora 36
- **pyproject.toml**: https://gist.github.com/steven-bioinfo/314fa893b177d39bbe1c925aec9fcc2a
#…
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### Description of bug
```console
[tp59565@genossh:MultiQc] $ more MultiQcFastQc.out
Tue Dec 12 01:13:07 CET 2023
[WARNING] multiqc : MultiQC Version v1.17 now available!
[INFO ] …
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It may be an overly cautious gcc 12.3.0 compiler but during a *successful* linking I see:
```
[100%] Linking CXX executable /sw/bioinfo/grenedalf/0.3.0/src/grenedalf/bin/grenedalf
In member funct…
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```console
art@orolo:~/git/western-bioinfo.github.io$ bundle exec jekyll build
/home/art/git/western-bioinfo.github.io/vendor/bundle/ruby/3.0.0/gems/sass-3.7.4/lib/sass/engine.rb:46:in `require': ca…
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Sorry to bother you, but the error has bothered me for a long time.
Here is the command:
gtdbtk classify_wf --genome_dir /media/pjw/PJW_2/PJW-EXPERIMENT/BIOINFO_PJW/NCBI_DATA_RefSeq_DOWNLOAD_FILTER1…
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- Very nice and thorough pseudocode! Much better than mine anyway.
- looks like you are going to avoid loading everything into memory, adjust for soft clipping, and account for reverse complements
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### Description of the bug
When searching for a project in wetlab, I encountered an error that might be related with projects with more than one run per user. In this case the error is encountered …
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### Description of the bug
FYI, **ASV_seqs.fasta** is present in the work directory (b12ddbfb05b35bef6eb415cb9f1ef0). I've no clue on the origin of the error.
```
ERROR ~ Error executing process …