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I followed the instruction of using run_docking_inference.py, supplied pdb file from Posebuster dataset, sdf file of ligand from Posebuster dataset, and txt file of smiles converted from ligand. I tes…
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Molecule.from_file() can not read pdb file, what should I do? thank you
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[//]: # (You can add comment regarding your issue hereafter)
[//]: # (End of issue comments)
Hereafter are the proposed values for the attributes of the new term
| key | value |
| --- | --- |
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Fetch food item data from the CalorieNinja API to get calorie and nutritional information.
Implement a search function for users to find food items by name.
Tasks:
- Set up API call to fetch food…
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Hi!
I am trying to download the full db using Aspera and I got an error at step 9 :
Completed: 392708K bytes transferred in 58 seconds
(54553K bits/sec), in 14 files, 1 directory.
2022-02-15 …
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Hi Hesham,
this is not a real problem but solving it would make life easier :-D
I successfully ran VCF2PROT v0.1.4 but I add to correct the transcript identifier in the VCF file as well as in the …
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Hi.
I am running topcons2 using singularity; most proteins get predicted, but some are not.
An example of the error file is attached.
I am not sure what is wrong.
Thanks.
Petro.
[error.zip](h…
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Implementations should model the belt analytically
When computing the integral, one needs to subtract the protein in the center:
- subtract the individual contributions of the atoms
- width o…
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I'm attempting to generate predictions for multimeric complexes, where one chain is a chimeric/fusion protein and has components from different organisms. About ~85% of this chain is from one organism…
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I'm creating the issue because I'm not entirely clear on what to do. I believe someone in Emek's group can built improve pathway commons models if we do correlations with the data in pr #6, we just ne…