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Why is 0.8 the best diss_thresh? The 0.8 gave only 3-4 A/B modules.
The higher the value, the less modules are created and more genes per module are present.
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Hi,
I was running the vignette example, and after running the line
`> data_obj = featureConstruct(data_obj, method = "GlobalPanel");`
I got the following error:
`Error in data[temp5, , drop = …
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GitHub repository of the package we wish to submit to _Bioconductor_
- Repository: https://github.com/microbiome/microbiome
Note: this is a resubmission of the microbiome package in Bioconductor a…
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In preparation to supporting R 3.4, we are migrating any non-bio-related packages over to the conda-forge channel. This issue aims to organize and track the progress.
Below are the results of:
`…
daler updated
6 years ago
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/hidelab/pcxnData
Confirm the following by editing…
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Hi, I encountered a wired issues about Waters data.
I convert raw data from RAW to mzxml with msconvert( now they have lockmass refiner to correct the data). The mzxml data still have the lock mass…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/PriceLab/TReNA
Confirm the following by editing e…
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I have encountered some bug (I think) where retcor fails.
```
Processing 456338 mz slices ... OK
Error in (function (classes, fdef, mtable) :
unable to find an inherited method for function …
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R/WGCNA is part of GN2
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Hello,
Here's what happens when I follow your [tutorial] with my data:
[tutorial]: http://bioconductor.org/packages/release/bioc/vignettes/SC3/inst/doc/my-vignette.html
```r
library(scater)
…