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Annotate 'in historical homology relation' with a custom AP `homology_similarity_score` based on https://github.com/AllenInstitute/MOp_taxonomies_ontology/blob/main/mouseMOp_CCN202002013/Mouse_CrossS…
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Hi!
I am exploring the option of using groot-db as it combines 3 well used AMR databases.
I believe that this is a very good idea but i am facing some issues that I believe is good to address.
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**long non-coding RNA**: I used definition from wikipedia: Long non-coding RNAs (long ncRNAs, lncRNA) are non-protein coding transcripts longer than 200 nucleotides.
Alternative term: lncRNA
Parent: …
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I'm interested in particular GO terms in my input files, but they do not get included in the "main data table" (GO division)_(input filename). I understand that all original GO terms aren't actually a…
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Musing about a few things we could do for the next manuscript update
- Extend analysis to full open access subset of PubMed + bioRxiv
- Include metrics about how label functions improve over time,…
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I am getting the error shown on the attached screenshot. Can I get some pointers?
![Screenshot (50)](https://user-images.githubusercontent.com/26459707/127054683-9cec7cee-2939-47ce-8f56-7135fd82a3b…
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To create a common 'look and feel' for browsing phenotype ontologies, we would like to start thinking about what kind of standard upper-level distinctions we can recommend for phenotype concepts. [Her…
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We shouldn't place a foreign key requirement for references when someone does not have them, or doesn't want to manage them. This means that a VCF should be able to be added with no other data (other …
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This issue is essentially the same as #552 and #553 except for isopropranolol - gene - allergic disease.
![image](https://user-images.githubusercontent.com/26254388/114592689-3333fe80-9c59-11eb-858…
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As per Chris Mungal's suggestion in the OBO Foundry Slack, modelling countries etc as classes is bad practice, as is our particular axiomatisation.
Review possible options for making countries et a…