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- [ ] Find geneset enrichment analysis (enrichR) to incorporate into our shiny app
- [ ] Use the below genes in those tools to start writing code and functions to be used in our shiny app
```
BPI…
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## Talk Title
UniProt, Rhea, Swiss-Lipids and HAMAP and from huge to tiny. Practical SPARQL in the life sciences
## Session Overview
[UniProt](https://sparql.uniprot.org/sparql) is the largest pu…
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Hi there,
I've made a small prototype Nextflow pipeline to run Augustus in PPX mode with custom protein profiles, via Docker or Singularity:
https://github.com/photocyte/luciferase-PPX-predictor-n…
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> http://dx.doi.org/10.1371/journal.pone.0141287
>
> **Motivation:** We introduce a new representation and feature extraction method for biological sequences. Named bio-vectors (BioVec) to refer to…
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Hello,
First, thank you so much for making this outstanding software available to the bioinformatics community.
I ran into this weird error from snps.from.file function:
```
> snps.mb.frombed_OU…
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Hi,
Thanks for developing this tool. I'm using scasa for isoform quantification in 10x data and i used the annotation file of Homo_sapiens_GENCODE_42 version you provided. However, in the quantific…
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Hello, I am using the RnaSeqSampleSize webapp and wondering what the "phi0 Dispersion for prognostic genes" parameter is. Can someone please give me what this entails? It seems like some error term.
…
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https://pubmed.ncbi.nlm.nih.gov/35140201/
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE167998
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I've been doing some background research for a project I've been working on. I came across the definition of an OLAP DB and OLAP Cube, and I can't help but see the similarities to Zarr.
https://en.w…