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I think the text should express a bit more caution towards the final product of sequence denoising/quality control and clustering/ASV detection. Any occurrence dataset that is exclusively based on env…
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Hey, how does one accomplish this?
"Then, after completing MetONTIIME installation, set the MINICONDA_DIR variable in config_MinION_mobile_lab.R to the full path to miniconda3 directory."
I see …
KFeye updated
3 years ago
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Proposed reworking of this paragraph by @birgitgemeinholzer:
> It does not express any view on the issue of the sharing of benefits arising from access to digital sequence information, the subject of…
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## New term
* Submitter: Plazi (Donat Agosti, @myrmoteras)
* Justification (why is this term necessary?): Specimens are the basis for taxonomic research and are cited in taxonomic treatments and…
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Right now, equality of table collections is defined in a very strict manner (see [here](https://github.com/tskit-dev/tskit/blob/2b7bd7d64923fe720d3fd3bd99d678373e9b63c6/c/tskit/tables.c#L7735)). All t…
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Hi Sebastian,
How's it going? All good I hope.
I was playing with Arriba on some samples for which we have tumor **and** normal RNA. Part of the question I was trying to answer myself was: how …
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Hi Ben and others, I am interested in estimating the rate of index hopping (aka tag switching or index bleed) in my Illumina MiSeq dataset.
I included synthetic "ITS" sequences (sensu [Palmer et a…
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Hi All,
In the past I have used the "classic" datamonkey website to do ancestral state reconstructions, but it is no longer an option and the new website doesn't have an ASR option. Is there a tuto…
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Do I really need to install JAVA on my desktop (Pop!_Os)?
Do I really need to install JAVA to run canu?
Complete documentation at http://canu.readthedocs.org/en/latest/
```
jjf@system76-pc:~…
jjfid updated
3 years ago
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Hi,
First, I would like to thank you for this nice tool.
I am wondering about a sentence meaning mentioned on the GitHub page.
You wrote about a transposition event "the example transpositio…