-
I have a mzXML file which I can read with pyopenms 2.0 on Mac OS X but not on Windows: https://polybox.ethz.ch/public.php?service=files&t=f05ca09ff41a5aad86167bffa38b4530
(The file is shortened and co…
-
Hi all,
I am reading in a centroided mzXML file from an Orbitrap instrument using
``` R
xfile_raw = xcmsRaw(mzXMLfiles[1])
```
where `mzXMLfiles[1]` is this file: https://github.com/vanmooylipidomi…
-
```
Hi.
This isn't an issue so much as a request for example code.
I just want to use mstoolkit to read spectra from mzXML, mzML and the other
open XML file formats.
Ideally I want a function wher…
-
Hi,
under WINDOWS7 I uninstalled Rmpi and only use snow now. IPO fires up,
but after the first optimization round it breaks. BTW this was a tested and working version.
[Central Carbon Metabolism](http…
-
currently when a spectra is being loaded from mzml the spectra are not ordered according toretention time. E.g.
spectra
-
Hi, I am trying to run the example script with the MTBLS213 data,
and get the following error in PuInc_seeker(). Very often this is due
to a missing DROP=FALSE in some access, so that a matrix/datafr…
-
```
(Collect change requests for the CV here.)
[Term]
id: PI:00216
name: sequest:PeptideRank
def: "The SEQUEST result 'Rank' in out file (peptide)." [ref:ref]
is_a: PI:00153 ! search engine specific …
-
```
Section 5.1.4 of the specification states:
A is linked to the source spectrum (in an
external file) from which the identifications are made by way of a
reference in the spectrumID attribute and …
-
```
> What steps will reproduce the problem?
An error always occurred at importing PSMs from .mzid file.
> What is the expected output? What do you see instead?
Thu Apr 23 13:30:07 KST 2015 Im…
-
Hi can't figure out what's wrong. I
```
> biocLite("mzR")
BioC_mirror: http://bioconductor.org
Using Bioconductor version 3.1 (BiocInstaller 1.18.3), R version
3.2.0.
Installing package(s) ‘mzR’
t…