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Hi there,
I'm very excited to try using `decontam`, but I'm not sure it'll work with our data. I'd be grateful for any advice.
I've got the following `phyloseq` object (16 true samples and 5 con…
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library(MicrobiotaProcess)
library(ggplot2)
library(phyloseq)
rm(list=ls())
options(stringsAsFactors = F)
setwd("C:/Users/lishu/Desktop/ARG/stin/3.1.1/")
getwd()
otu
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# GLP TOOTH WHITENING TIPS
https://www.godlikeproductions.com/forum1/message3536009/pg1
https://www.godlikeproductions.com/forum1/message3705030/pg1
- This is my recipie for a dry toothpaste.…
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**Background**:
The [cBioPortal](http://www.cbioportal.org/) R client opens up cancer sequencing data hosted on the cBioPortal for Cancer Genomics to alternative analysis platforms such as [Biocon…
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https://github.com/bpeacock44/targeted_microbiome_via_blast/blob/4a8b36e2ce29784bb77630f2b8639de6815e65b0/pipeline_scripts/mbio_part1.sh#L83
This line here is missing an echo statement. This curren…
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When one searches for cross-correlation, they'll see that it's mostly related to time series correlations. That can become a font of confusion for beginners.
Might "cross-association" reflect bette…
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So the neatsort function acts on ordinated data and sorts before it's plotted in a heatmap, so hierarchical clustering isn't used which can often distort relationships. https://bmcbioinformatics.biome…
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"Hey, thank you very much for this cool tool. I'm working on amplicon sequencing derived from public data with taxa at the genus level. According to the instructions, the only mandatory input is the a…
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Study 751 is to be reviewed.
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This commit https://github.com/microbiome/OMA/commit/207952f25fc7283c0adb3e6141fad28865a874a6 introduced a failure of build. See the comments in the commit.