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Greetings. The SYNY home page shows a combined barplot output:
https://github.com/PombertLab/SYNY?tab=readme-ov-file#barplots
But when I run SYNY and I look in BARPLOTS/PNG or BARPLOTS/SVG direc…
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Analysis on additional papers:
Valerio: I debugged the text extraction and modified GROBID parameters to include
section names (headers) as sentences.
I also checked all the other issues you r…
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I am currently trying to construct a custom reference for my single cell data. The cells used had a plasmid integrated which provides destabilised enhanced-GFP expression. I have followed the steps ou…
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7/19/2023
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Order Flow
priority:
- Put "order flow" inside shopping cart
~~- make sure all views in order flow have tests~~
- one more wireframe for a view [complete by tomorrow]
~~- b…
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Hi, I got this issue :
/home/emmanuel/anaconda3/envs/new_one/lib/python3.11/site-packages/Bio/Data/SCOPData.py:18: BiopythonDeprecationWarning: The 'Bio.Data.SCOPData' module will be deprecated in…
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Hello;
I am getting the following error after having Unicycler running for several days. It seems to occur after the SPAdes assemblies and during the 'Finding single copy segments' step. Thank you …
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Curated by @MPiovesana
https://canto.phi-base.org/curs/bf15e81bf1ab6473
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Hi, I'm trying to build a UniVec_Core database. I keep running into this unable to match taxonomy targets error. I also tried to use taxID 28384 for all the univec_core sequences, just to see if that …
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In the desktop IGV viewer when softclip reads are selected it will show the overhands at the ends of the reference. This is extremely useful for whole plasmid sequencing. Is this something that can be…
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First off, I'd like to thank you for providing such a great tool!
To the point to which I am writing this issue, I can't figure out of this is something easily built in or if it requires more python …