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Hi,
Genome_fasta : ~/MicroExonator/c_elegans.PRJNA13758.WS276.genomic.fa
Gene_anontation_bed12 : ~/MicroExonator/Caenorhabditis_elegans.WBcel235.bed12
GT_AG_U2_5 : NA
GT_AG_U2_3 : NA
conservati…
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Hi,
I am working on C. elegans and I want to run SCENIC.
But there is not input file to download for C. elegans in https://rawcdn.githack.com/aertslab/SCENIC/701cc7cc4ac762b91479b3bd2eaf5ad5661dd8c…
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## Release notes
- [https://docs.galaxyproject.org/en/master/releases/21.01_announce.html](https://docs.galaxyproject.org/en/master/releases/21.01_announce.html)
- [https://docs.galaxyproject.org/en…
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Hi all,
I've seen a few whispers on the ABySS Google Groups pages indicating that it's possible to use Abyss for de novo assembly of whole exome (not genome) data. One thing Shaun has replied to a …
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Hello,
First of all let me thank you for setting up this tool, been searching for something like it before. I tried to follow the tutorial provided with my own dataset and provided the same paramet…
fka21 updated
3 years ago
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In the step where we do the ENA submissions, we write files to a git repository, which keeps track of which changes we do to the ENA submissions. Each submission is saved with a specific tag. We could…
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should link to the gene targeted, and any phenotypes
Example https://wormbase.org/species/c_elegans/rnai/WBRNAi00044514
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**Describe the bug**
returnSamples errors if the samples requested come only from a single dataset.
**To Reproduce**
``` r
suppressPackageStartupMessages({
library(curatedMetagenomicData)
…
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Hello, I just tried out CellBender on 21 datasets of 10x v2 single nuclei data that should be generally comparable (Cell Ranger retains ~1500-3500 barcodes in each) but I got wildly variable results w…