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**Attach your log file**
ArchR has a built-in logging functionality for all complex functions. You MUST attach your log file (indicated in the console output) to this issue. Just drag and drop it her…
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HDF5 [does not natively have a boolean format](https://support.hdfgroup.org/HDF5/hdf5-quest.html#bool). h5py (and by extension pynwb) handles this by creating an enumerated type with an underlying dat…
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cellxgene provides H5AD files for each data set. A recent download of [this one][] (sorry, there is no direct url; click on the cloud download button) has content like (from `rhdf5::h5ls()`)
```
1…
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```
> sunset(seq(as.Date("2021-03-13"),as.Date("2021-03-17"),by=1),lon=-99.37276,lat=31.56916, elev=-5, force_tz=F)
```
[1] "2021-03-12 20:03:19 EST" "2021-03-13 20:04:00 EST" "**2021-03-14 22:04…
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Thank you for creating this wonderful package.
I got the following error when executing the OverlapModulesDEGs function.
Please let me know how to solve this problem.
**script**
```
markers
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I'm able to use 0.17.1 and make a snapshot but if I install that latest version 0.17.2 it gives me the following error:
'Do you want to proceed? [y/N]: y
Error in renv::snapshot() :
aborting snapsh…
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Hello,
I’m trying to run the vignette “Integrating scRNA-seq and scATAC-seq data” https://satijalab.org/seurat/articles/atacseq_integration_vignette.html
I’m able to load both modalities.
How…
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When I try to run `FindVariableFeatures` on my dataset I get the following error.
```r
object rows()
```
I am trying to follow this vignette with my own dataset that has about 9k features by 8…
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Hi,
I find that `open_matrix_anndata_hdf5` cannot open h5ad files from Genome-wide Perturb-seq datasets:
https://plus.figshare.com/articles/dataset/_Mapping_information-rich_genotype-phenotype_lands…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/js2264/OHCA
Confirm the following by editing each…