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I have a question regarding the output of enrichIt(). This type of analysis is new to me, so maybe the question is quite simple:
I tried to run enrichIt on a seurat object (13 clusters) with two gene…
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Hello,
As an action of the Oct 2017 GOC meeting, ECO has create evidence codes for HTP experiments.
We ( @hatrill and the HTP working group) will provide annotation guidelines; once these are …
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https://mp.weixin.qq.com/s/pN4qWdUszuGqr8nOJstn8w
ixxmu updated
2 years ago
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When executed in an R shell on the same machine that generated the HTML via snakemake, the gene set enrichment analysis is just fine. The variable "max" indicates >800 terms to be found, but there is …
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/rx-li/EasyCellType
Confirm the following by editi…
rx-li updated
2 years ago
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Hi,
I was trying the runGSEA() function mentioned [here](https://themilolab.github.io/SPATA2/articles/spata-v2-gsea.html) in the section 2. It seems the function should be runGSEA() instead of runGse…
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Recently I have studied how to analyze the time-series RNA-Seq and read some articles. Some articles used DREM to find the signaling pathways or construct the signaling network, which prompts me to do…
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Hi all,
First, thank you for keeping this repository very interactive, I really appreciate it.
I had a question on the method itself this time. If I understand well, for each pathway, your method s…
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https://mp.weixin.qq.com/s/u-0Pa7jXsaNUVx8oynLoxw
ixxmu updated
2 years ago