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A number of ontologies have properties with non-standard OBO identifier structures. These reduce integration in Ubergraph. Ideally all these would be either added to RO or given identifiers in their o…
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> I'd like to work with the [Plazi](https://plazi.org) taxonomic treatments dataset, which includes many images with associated anatomical descriptions. However, the images typically contain several s…
hlapp updated
11 months ago
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as I was updating PO in the sol genomics database, I've ran into an issue with participates_in relationship,
which creates references between terms in plant_anatomy node and 'sporophyte phase' or 'ga…
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The [DANS KOSo Observatory](https://knoworg.org/the-dans-koso-observatory/) contains more detailed information about KOS, in particular information about KOS versions. The dataset already contains BAR…
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When trying to import the unified phenotype ontology (UPHENO), I run into some errors about `Too many cyclic paths (> 1000).` Is there something different about this ontology? If so, is there a way i…
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To create a common 'look and feel' for browsing phenotype ontologies, we would like to start thinking about what kind of standard upper-level distinctions we can recommend for phenotype concepts. [Her…
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term name: 'stem senescence' is duplicated:
[Term]
id: [TO:0001036](http://purl.obolibrary.org/obo/TO_0001036)
name: stem senescence
def: "A measurement of aging of stem." [GR:cwt]
synonym: "culm sen…
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I've been attempting to use the uPheno 2 OWL file (http://purl.obolibrary.org/obo/upheno/v2/upheno.owl) with the [owlready2](https://owlready2.readthedocs.io/en/v0.36/index.html) Python library. Attem…
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**Preferred term label:**
Bowel bag
**Synonyms**
**Definition (free text, please give PubMed ID)**
The volume of the abdomen that contains the small and large bowel (+ the inter space).
*…