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Ticket to expand FileTypeEnum permissible values to accommodate making data objects for metaproteomics
aclum updated
7 months ago
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Hi, thanks for the great project. I'm attempting to load the latest Unimod XML file into Postgres using pyteomics and have encountered a few errors that I've attempted to solve along the way. I've doc…
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Hi Julian,
I am wondering if PIA can adapt imaging MS data like imzML. This format is used for new bruker MALDI-TOF and it seems there is no way to transfer the imzML file into other format that ca…
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Hi,
when I the program using the test data:
```
singularity exec --writable-tmpfs -e \
/nfs3_ib/ip29-ib/ip29/sheela_group/programs/containers/dia-ms.sif \
python /timsconvert/bin/run.py --inp…
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Add a function to detect isotopes based on a `numeric` with m/z values and one with the related intensities. This could be implemented as a two-step function:
1) group peaks in m/z vector based on …
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Hi @mwang87 @gtluu. The error is reported when I run the follow command. Looking forward to your help. Thanks a lot in advance
Command:
```
python3 /app/bin/run.py \
--input 20210909_PRO2_LS_…
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Trending statistics from microsalt analyses in vogue can give an insight into the quality of the lab work performed by Clinical genomics. We need to decide which metrics to monitor.
The metrics tha…
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Hello!
I run MALDI.R to regenerate processed maldi data, but there is some bug in line 187 `select(HMDH,names(as.data.frame(spectra_S1[r.ow, ,drop=F])))`.
In my opinion, there is no parameter no…
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Hai Matthijs
will you be including the (rather extensive) update on the candida taxonomy?
https://pubmed.ncbi.nlm.nih.gov/33028600/
Greeting
Rogier
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Hello, thanks for this repo! I was wondering if you have a python version of this package planned, as I have started to work on MALDI images using Python.